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An introduction in processing and evaluation of X-ray images with SoilJ

During the recent years, it has become more and more obvious that soil structure plays a fundamental role in regulating processes in soils. As soil structures are hierarchical, complex and highly variable, studies involving soil structures require a relatively large number of replicate samples. Three-dimensional X-ray imaging provides an excellent tool to map out soil structure, but image analyses are still time intensive and require experience. This limits the number of X-ray images, and thus replicate samples that can be analyzed within reasonable time scales. SoilJ is an open-source and free plugin for the open-source image processing software ImageJ. It is tailor-made for the analyses X-ray images of soil and aims at automatizing the necessary image processing and analyses steps. This course gives a short introduction into X-ray image processing and analyses in general and specifically with SoilJ, provides an overview about SoilJ functionalities and offers guidance for researchers interested in participating in developing their own plugins. In the second part of this short course, hands-on for X-ray image analyses is offered.

Co-organized by HS11/SSS11
Convener: John Koestel | Co-conveners: Wiebke Mareile HeinzeECSECS, Katharina Meurer

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